Wade Winkler headshot
Contact Info
Office: 3115 Bioscience Research Bldg
Lab: 3112 Bioscience Research Bldg
Office Phone: 301-405-7780
Lab Phone: 301-405-9937
Wade Winkler
Professor

Teaching

  • Principles of Microbiology (BSCI283)
  • Microbial Genetics (BSCI412)
  • Teaching Science and Professional Development (BISI701)

Graduate Program Affiliations

  • BISI-Molecular & Cellular Biology (MOCB)

Research Interests

The regulation of transcription initiation by DNA-binding transcription factors has long been presumed to be the primary mode of genetic regulation in bacteria. Indeed, most bacteria encode for ~100-300 transcription factors. However, initiation is only the first step; many downstream events are also critically important in establishing mRNA and protein levels. In fact, it has become increasingly obvious in the past decade that post-initiation regulatory mechanisms are much more common that previously realized. These post-initiation regulatory strategies can exert their influence over several processes, including transcription elongation, translation efficiency, and mRNA stability. The specific goal of the Winkler laboratory is to discover the molecular mechanisms, overall usage and synthetic applications of post-initiation regulatory strategies in bacteria. Our long-term goal in elucidating these regulatory circuits is to uncover fundamentally important regulatory features in pathogenic microbes and to uncover new potential targets for development of antimicrobial compounds. 


Education

  • Ph.D., The Ohio State University, 2002
  • Postdoctoral Training, Yale University, 2004

All Publications

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Latest Publications

Kim SK,Orr MW,Turdiev H,Jenkins CC,Lormand JD,Myers TM,Burnim AA,Carter JA,Kung WC,Jiang X,Sondermann H,Winkler WC,Lee VT
Cell Rep. 2024 Sep 13;43(9):114759. doi: 10.1016/j.celrep.2024.114759. Epub 2024 Sep 13
Elghondakly A,Jermain MD,Winkler WC,Ferré-D'Amaré AR
Structure. 2024 Sep 5;32(9):1488-1497.e5. doi: 10.1016/j.str.2024.06.001. Epub 2024 Jul 2
Myers TM,Ingle S,Weiss CA,Sondermann H,Lee VT,Bechhofer DH,Winkler WC
Nucleic Acids Res. 2023 Oct 13;51(18):9804-9820. doi: 10.1093/nar/gkad662. Epub
Trettel DS,Winkler WC
Microbiol Spectr. 2023 Feb 14;11(2):e0335722. doi: 10.1128/spectrum.03357-22. Epub 2023 Feb 14
Weiss CA,Myers TM,Wu CH,Jenkins C,Sondermann H,Lee VT,Winkler WC
Nucleic Acids Res. 2022 Nov 28;50(21):12369-12388. doi: 10.1093/nar/gkac1091. Epub
Lee VT,Sondermann H,Winkler WC
FEMS Microbiol Rev. 2022 Nov 2;46(6):. doi: 10.1093/femsre/fuac038. Epub
Trettel DS,Resager W,Ueberheide BM,Jenkins CC,Winkler WC
Structure. 2022 Apr 7;30(4):537-550.e5. doi: 10.1016/j.str.2022.02.002. Epub 2022 Feb 24
Lormand JD,Kim SK,Walters-Marrah GA,Brownfield BA,Fromme JC,Winkler WC,Goodson JR,Lee VT,Sondermann H
Elife. 2022 Jan 28;11:. doi: 10.7554/eLife.77092. Epub 2022 Jan 28
Kim SK,Lormand JD,Weiss CA,Eger KA,Turdiev H,Turdiev A,Winkler WC,Sondermann H,Lee VT
Elife. 2022 Jan 28;11:. doi: 10.7554/eLife.77091. Epub 2022 Jan 28
Papenfort K,Woodson SA,Schmitz RA,Winkler WC
Mol Microbiol. 2022 Jan;117(1):1-3. doi: 10.1111/mmi.14867. Epub
Lormand JD,Kim SK,Walters-Marrah GA,Brownfield BA,Fromme JC,Winkler WC,Goodson JR,Lee VT,Sondermann H
Elife. 2021 Sep 17;10:. doi: 10.7554/eLife.70146. Epub 2021 Sep 17
Elghondakly A,Wu CH,Klupt S,Goodson J,Winkler WC
J Mol Biol. 2021 Jul 23;433(15):167100. doi: 10.1016/j.jmb.2021.167100. Epub 2021 Jun 11
Weiss CA,Winkler WC
Methods Mol Biol. 2021;2323:153-170. doi: 10.1007/978-1-0716-1499-0_12. Epub
Goodson JR,Zhang C,Trettel D,Ailinger HE,Lee PE,Spirito CM,Winkler WC
Mol Microbiol. 2020 Aug;114(2):348-360. doi: 10.1111/mmi.14517. Epub 2020 May 13
Weiss CA,Hoberg JA,Liu K,Tu BP,Winkler WC
J Bacteriol. 2019 Aug 15;201(16):. doi: 10.1128/JB.00247-19. Epub 2019 Jul 24
Kim SK,Lormand JD,Weiss CA,Eger KA,Turdiev H,Turdiev A,Winkler WC,Sondermann H,Lee VT
Elife. 2019 Jun 21;8:. doi: 10.7554/eLife.46313. Epub 2019 Jun 21
Kaval KG,Gebbie M,Goodson JR,Cruz MR,Winkler WC,Garsin DA
J Bacteriol. 2019 May 15;201(10):. doi: 10.1128/JB.00703-18. Epub 2019 Apr 24
Orr MW,Weiss CA,Severin GB,Turdiev H,Kim SK,Turdiev A,Liu K,Tu BP,Waters CM,Winkler WC,Lee VT
J Bacteriol. 2018 Dec 15;200(24):. doi: 10.1128/JB.00300-18. Epub 2018 Nov 26
Goodson JR,Winkler WC
Microbiol Spectr. 2018 Sep;6(5):. doi: 10.1128/microbiolspec.RWR-0031-2018. Epub
Kaval KG,Singh KV,Cruz MR,DebRoy S,Winkler WC,Murray BE,Garsin DA
mBio. 2018 May 8;9(3):. doi: 10.1128/mBio.00790-18. Epub 2018 May 8